STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3378PFAM: protein of unknown function DUF218; KEGG: bms:BRA0426 Bme2 protein. (206 aa)    
Predicted Functional Partners:
Oant_3380
PFAM: glycosyl transferase family 4; KEGG: bms:BRA0428 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase, putative.
       0.792
Oant_3377
KEGG: bme:BMEII0842 hypothetical protein.
       0.791
Oant_3376
KEGG: bms:BRA0424 acetyltransferase, CysE/LacA/LpxA/NodL family.
       0.789
Oant_3379
KEGG: bms:BRA0427 glycosyl transferase, group 2 family protein.
       0.785
Oant_3381
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: bms:BRA0429 polysaccharide biosynthesis protein.
       0.439
Oant_3382
PFAM: glycosyl transferase family 2; KEGG: atc:AGR_L_153 hypothetical protein.
       0.419
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.