STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3498TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_2358 amino acid ABC transporter. (218 aa)    
Predicted Functional Partners:
Oant_3499
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2357 glutamine ABC transporter, ATP-binding protein.
  0.996
Oant_3497
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pfl:PFL_2359 amino acid ABC transporter, permease protein.
 
  
 
0.977
Oant_3496
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: pfl:PFL_2360 amino acid ABC transporter, periplasmic amino acid-binding protein.
   0.975
Oant_2848
PFAM: extracellular solute-binding protein family 3; KEGG: pfl:PFL_2360 amino acid ABC transporter, periplasmic amino acid-binding protein.
 
   0.948
Oant_2214
PFAM: extracellular solute-binding protein family 3; KEGG: bmb:BruAb1_0874 hypothetical amino-acid ABC transporter, periplasmic binding protein protein.
 
   0.941
Oant_3710
PFAM: extracellular solute-binding protein family 3; KEGG: bmb:BruAb2_0595 amino acid ABC transporter, periplasmic amino acid-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
   0.940
Oant_3808
PFAM: extracellular solute-binding protein family 3; KEGG: bms:BRA0682 amino acid ABC transporter, periplasmic amino acid-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
   0.905
Oant_2235
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: bms:BR0955 amino acid ABC transporter, periplasmic amino acid-binding protein.
 
   0.897
Oant_2851
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2357 glutamine ABC transporter, ATP-binding protein.
   0.862
Oant_4075
PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr8119 ABC transporter ATP-binding protein.
   0.848
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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