STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3530PFAM: HI0933 family protein; KEGG: bms:BRA0499 hypothetical protein. (445 aa)    
Predicted Functional Partners:
Oant_3531
TIGRFAM: monovalent cation/H+ antiporter, subunit 1; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); Na? antiporter MnhB subunit-related protein; KEGG: bms:BRA0500 monovalent cation/proton antiporter, MnhA/PhaA subunit.
       0.519
Oant_3535
PFAM: multiple resistance and pH regulation protein F; KEGG: bmb:BruAb2_0718 monovalent cation/proton antiporter, MnhF/PhaF subunit.
       0.445
Oant_3536
TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na? antiporter subunit; KEGG: bmb:BruAb2_0717 monovalent cation/proton antiporter, MnhG/PhaG subunit.
       0.441
Oant_3532
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: bms:BRA0501 monovalent cation/proton antiporter, MnhC/PhaC subunit.
       0.437
Oant_3533
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bmb:BruAb2_0720 monovalent cation/proton antiporter, MnhD/PhaD subunit.
       0.437
Oant_3534
PFAM: cation antiporter; KEGG: bmb:BruAb2_0719 monovalent cation/proton antiporter, MnhE/PhaE subunit.
       0.437
Oant_1324
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bmb:BruAb2_0999 endonuclease/exonuclease/phosphatase family protein.
   
    0.404
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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