STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3533PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bmb:BruAb2_0720 monovalent cation/proton antiporter, MnhD/PhaD subunit. (543 aa)    
Predicted Functional Partners:
Oant_3531
TIGRFAM: monovalent cation/H+ antiporter, subunit 1; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); Na? antiporter MnhB subunit-related protein; KEGG: bms:BRA0500 monovalent cation/proton antiporter, MnhA/PhaA subunit.
 
 
0.999
Oant_3532
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: bms:BRA0501 monovalent cation/proton antiporter, MnhC/PhaC subunit.
 
 
 0.999
Oant_3534
PFAM: cation antiporter; KEGG: bmb:BruAb2_0719 monovalent cation/proton antiporter, MnhE/PhaE subunit.
 
 0.999
Oant_3535
PFAM: multiple resistance and pH regulation protein F; KEGG: bmb:BruAb2_0718 monovalent cation/proton antiporter, MnhF/PhaF subunit.
 
 
 0.999
Oant_3536
TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na? antiporter subunit; KEGG: bmb:BruAb2_0717 monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.999
Oant_2412
TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); NADH dehydrogenase subunit 5 domain protein; KEGG: bme:BMEI1147 NADH-quinone oxidoreductase chain L.
 
 
 0.964
nuoI
NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.869
nuoB
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity).
   
 
 0.744
Oant_3537
KEGG: bmb:BruAb2_0716 hypothetical protein.
       0.723
nuoD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
   0.702
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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