STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3539TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydD; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0762 transport ATP-binding protein CydD. (582 aa)    
Predicted Functional Partners:
Oant_3540
TIGRFAM: ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0509 ABC transporter, ATP-binding/permease protein.
 
 
0.999
Oant_3542
TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: bms:BRA0511 cytochrome d ubiquinol oxidase, subunit II.
 
  
 0.984
Oant_3541
PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bmb:BruAb2_0712 CydA, cytochrome d ubiquinol oxidase, subunit I.
 
  
 0.979
Oant_3543
TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: bms:BRA0512 YbgT protein.
 
  
 0.884
Oant_3538
KEGG: bmb:BruAb2_0715 hypothetical protein; Belongs to the GbsR family.
 
   
 0.836
Oant_3537
KEGG: bmb:BruAb2_0716 hypothetical protein.
       0.678
Oant_3533
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: bmb:BruAb2_0720 monovalent cation/proton antiporter, MnhD/PhaD subunit.
     
 0.655
Oant_3531
TIGRFAM: monovalent cation/H+ antiporter, subunit 1; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); Na? antiporter MnhB subunit-related protein; KEGG: bms:BRA0500 monovalent cation/proton antiporter, MnhA/PhaA subunit.
  
    0.650
Oant_3534
PFAM: cation antiporter; KEGG: bmb:BruAb2_0719 monovalent cation/proton antiporter, MnhE/PhaE subunit.
  
    0.644
Oant_3532
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: bms:BRA0501 monovalent cation/proton antiporter, MnhC/PhaC subunit.
       0.641
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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