STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3548PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0704 sugar ABC transporter, permease protein. (279 aa)    
Predicted Functional Partners:
Oant_3547
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0705 sugar ABC transporter, permease protein.
 
 0.993
Oant_3546
PFAM: extracellular solute-binding protein family 1; KEGG: bms:BRA0516 sugar ABC transporter, periplasmic sugar-binding protein.
 
 0.990
Oant_3814
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb2_0540 hypothetical ATP-binding ABC transporter protein.
 
  0.942
Oant_3549
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: bms:BRA0520 oxidoreductase, Gfo/Idh/MocA family.
 
     0.919
Oant_3457
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rle:RL2793 putative ATP-binding component of ABC transporter.
 
  0.918
Oant_0351
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PE00248 probable sugar ABC transporter, ATP-binding protein.
 
  0.914
Oant_0312
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bms:BR0238 sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.913
Oant_0364
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: atc:AGR_C_4558 probable ABC transporter ATP-binding protein Y4OS; Belongs to the ABC transporter superfamily.
 
  0.908
Oant_2481
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_466 sugar ABC transporter, ATP-binding protein.
 
  0.903
Oant_1669
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bms:BRA1183 sugar ABC transporter, ATP-binding protein, putative.
 
  0.901
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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