STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsA-4ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (516 aa)    
Predicted Functional Partners:
Oant_3568
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: atc:AGR_L_2681 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  0.991
Oant_3567
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: atu:Atu3490 ABC transporter, membrane spanning protein; Belongs to the binding-protein-dependent transport system permease family.
  0.990
Oant_3570
TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_L_2685 putative secreted solute-binding lipoprotein.
 
  0.961
Oant_3565
PFAM: carbohydrate kinase FGGY; KEGG: rle:pRL110408 putative L-xylulose kinase involved in competition for nodulation.
 
    0.876
rhaM
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
    0.854
Oant_4066
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: bmb:BruAb1_1619 RbsC-2, ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
   0.689
Oant_3346
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: atc:AGR_C_5111 sugar ABC transporter (permease); Belongs to the binding-protein-dependent transport system permease family.
 
   0.661
Oant_3571
Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: ret:RHE_PE00290 probable transcriptional regulator protein, DeoR family.
 
     0.642
Oant_2809
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: ret:RHE_CH00614 ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
   0.641
Oant_0290
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sme:SMb21375 putative sugar uptake ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
   0.637
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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