STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3576PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mlo:mlr7106 probable dehydrogenase. (257 aa)    
Predicted Functional Partners:
Oant_1379
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmb:BruAb2_0253 hypothetical 2-deoxy-D-gluconate 3-dehydrogenase.
  
  
 
0.916
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
 
 0.914
Oant_4233
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 0.826
Oant_2368
PFAM: PfkB domain protein; KEGG: bms:BR0858 2-dehydro-3-deoxygluconokinase, putative.
   
 0.822
Oant_2376
PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase; KEGG: bms:BR0850 ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
   
 
 0.805
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
 0.804
Oant_2766
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sme:SMb20974 putative oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.611
Oant_3578
KEGG: sme:SMa0392 ABC transporter, periplasmic solute-binding protein.
 
     0.524
Oant_3577
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMa0391 putative ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.491
hisC-2
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: sme:SMa0387 putative HisC3 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
       0.482
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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