STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3579PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0394 putative ABC transporter, permease. (314 aa)    
Predicted Functional Partners:
Oant_3580
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0396 putative ABC transporter, permease.
  
 0.965
Oant_3578
KEGG: sme:SMa0392 ABC transporter, periplasmic solute-binding protein.
 
  
 0.922
Oant_3577
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMa0391 putative ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.909
Oant_3714
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0329 spermidine/putrescine ABC transporter, permease protein.
  
 0.858
Oant_4153
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3393 ABC opine/polyamine transporter, inner membrane subunit.
  
 0.856
Oant_2802
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  
 0.853
Oant_4437
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3945 binding-protein-dependent transport systems inner membrane component.
  
 0.833
Oant_3925
Ornithine carbamoyltransferase; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR1609 spermidine/putrescine ABC transporter, permease protein, putative.
  
 0.825
Oant_2803
TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mes:Meso_4252 spermidine/putrescine ABC transporter ATPase subunit; Belongs to the ABC transporter superfamily.
 
 
 0.811
Oant_3928
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  
 0.778
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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