STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3585PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bam:Bamb_5305 FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (297 aa)    
Predicted Functional Partners:
Oant_3584
Transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: bja:blr7974 hypothetical protein.
 
   
 0.936
Oant_0816
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bmb:BruAb1_2080 Trx-1, thioredoxin; Belongs to the thioredoxin family.
  
 
 0.808
Oant_3832
PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bmb:BruAb2_0522 AhpC, alkyl hydroperoxide reductase C.
  
 
 0.800
Oant_3284
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bms:BRA0893 thioredoxin.
  
 
 0.733
Oant_3054
PFAM: Catalase domain protein; KEGG: bmb:BruAb2_0827 KatA, catalase.
   
 
 0.575
Oant_3583
Transcriptional regulator, GntR family; TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: mlo:mlr7110 transcriptional regulator.
       0.541
Oant_3582
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sme:SMa0400 putative zinc-binding.
       0.533
Oant_0006
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: bmb:BruAb1_0004 MoeB, molybdopterin biosynthesis protein.
  
  
 0.509
Oant_3238
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: atc:AGR_C_2205 hypothetical protein.
   
 
 0.507
Oant_4051
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: atc:AGR_C_2205 hypothetical protein.
   
 
 0.507
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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