STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3589PFAM: NMT1/THI5 like domain protein; KEGG: bmb:BruAb2_0896 hypothetical ABC transporter, periplasmic binding protein. (346 aa)    
Predicted Functional Partners:
Oant_3590
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0895 ABC transporter, permease protein.
 
  
 0.952
Oant_3591
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA0286 ABC transporter, ATP binding protein.
 
  
 0.951
Oant_3514
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0493 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit.
 
  
 0.822
Oant_3513
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_3115 ABC transporter related.
 
  
 0.777
Oant_3592
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0755 hypothetical taurine ABC transporter, permease protein.
 
  
 0.740
Oant_4007
PFAM: NADPH-dependent FMN reductase; KEGG: pde:Pden_5119 NADPH-dependent FMN reductase.
  
    0.702
Oant_1429
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_257 nitrate transport protein NrtB.
 
  
 0.613
Oant_3593
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0754 ABC transporter, ATP-binding protein.
  
  
 0.588
Oant_1428
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_259 probable ABC transporter.
 
  
 0.576
Oant_4433
PFAM: extracellular solute-binding protein family 1; KEGG: pol:Bpro_3941 extracellular solute-binding protein, family 1.
  
    0.535
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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