STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3597Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (384 aa)    
Predicted Functional Partners:
Oant_2534
KEGG: bmb:BruAb1_0776 hypothetical protein.
  
     0.769
Oant_1096
KEGG: bmb:BruAb1_1786 hypothetical protein.
 
     0.766
Oant_0928
PFAM: outer membrane lipoprotein omp19; KEGG: bmb:BruAb1_1906 Omp19, lipoprotein Omp19.
  
     0.761
Oant_2093
KEGG: bms:BR1011 hypothetical protein.
  
     0.760
Oant_1232
KEGG: bms:BR1681 hypothetical protein.
  
     0.759
Oant_1191
KEGG: bmb:BruAb1_1710 hypothetical protein.
  
     0.756
Oant_0991
KEGG: bmb:BruAb1_1965 hypothetical protein.
  
     0.736
Oant_2663
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: bmb:BruAb1_0635 histidine kinase.
  
 
 0.735
Oant_2111
KEGG: bmf:BAB1_1043 hypothetical protein.
  
     0.726
Oant_0132
Porin; PFAM: porin; KEGG: bmb:BruAb1_0115 outer membrane protein, hypothetical.
  
 
 0.718
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.