STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3638PFAM: extracellular solute-binding protein family 5; KEGG: bms:BRA0576 peptide ABC transporter, periplasmic peptide-binding protein. (592 aa)    
Predicted Functional Partners:
Oant_0013
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb1_0008 ABC transporter, permease protein.
 
  
 0.820
Oant_0012
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bme:BMEI1937 oligopeptide transport system permease protein OppC.
 
  
 0.812
Oant_0011
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb1_0006 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.713
Oant_3602
PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bmb:BruAb2_0688 ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.606
Oant_3639
PFAM: DSBA oxidoreductase; KEGG: bms:BRA0577 FrnE protein, putative.
       0.537
Oant_2959
ABC transporter related; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20478 putative dipeptide ABC transporter permease and ATP-binding protein.
  
  
 0.470
Oant_0014
PFAM: extracellular solute-binding protein family 5; KEGG: bmb:BruAb1_0009 ABC transporter, periplasmic substrate-binding protein, hypothetical.
  
  
 
0.454
Oant_0015
PFAM: extracellular solute-binding protein family 5; KEGG: bme:BMEI1934 periplasmic oligopeptide-binding protein precursor.
  
  
 
0.427
Oant_2799
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; ABC transporter related; SMART: AAA ATPase; KEGG: aci:ACIAD3488 putative amino acid transport protein (ABC superfamily, ATP_bind and membrane).
  
 
 0.410
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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