STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3702PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: eca:ECA4250 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (357 aa)    
Predicted Functional Partners:
Oant_3705
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4247 ABC transporter permease protein.
 
     0.730
Oant_3700
ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: rle:RL3886 putative Fur regulated salmonella iron ABC transporter component.
    
  0.610
Oant_3701
ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: rle:RL3887 putative iron transmembrane ABC transporter component.
    
  0.610
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
  0.593
Oant_3339
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0424 ABC transporter, membrane spanning protein.
 
   0.584
Oant_0363
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_C_4555 hypothetical protein.
 
 0.548
Oant_3703
PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA4249 ABC transporter periplasmic binding protein.
 
     0.532
Oant_0352
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc01979 putative sugar transport system permease ABC transporter protein.
   0.514
Oant_0311
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BR0237 sugar ABC transporter, permease protein.
   0.508
Oant_3897
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0482 hypothetical sugar ABC transporter, permease protein.
 
   0.508
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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