STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3704PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4248 ABC transporter permease protein. (274 aa)    
Predicted Functional Partners:
Oant_3705
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4247 ABC transporter permease protein.
 
  
 0.965
Oant_3703
PFAM: extracellular solute-binding protein family 1; KEGG: eca:ECA4249 ABC transporter periplasmic binding protein.
 
     0.893
Oant_3707
KEGG: gme:Gmet_2946 HAD-superfamily hydrolase subfamily IA, variant 3.
 
     0.867
Oant_3706
PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rle:pRL110031 putative HTH-type transcriptional regulator.
 
     0.812
Oant_3340
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0807 ABC transporter, permease protein.
 
  
 0.561
Oant_3580
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0396 putative ABC transporter, permease.
 
  
 0.557
Oant_3578
KEGG: sme:SMa0392 ABC transporter, periplasmic solute-binding protein.
 
  
 0.549
Oant_3577
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMa0391 putative ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.517
Oant_3702
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: eca:ECA4250 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.499
Oant_2802
Extracellular solute-binding protein family 1; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
  
 0.483
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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