STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3826PFAM: FAD dependent oxidoreductase; KEGG: bms:BRA0702 D-amino acid oxidase family protein. (442 aa)    
Predicted Functional Partners:
Oant_0303
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Glycine cleavage T-protein barrel; KEGG: bms:BR0231 sarcosine oxidase, alpha subunit.
 
 
 0.892
Oant_4435
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_3943 BFD-like (2Fe-2S)-binding region.
 
 0.618
Oant_3316
PFAM: FAD dependent oxidoreductase; KEGG: rpa:RPA2638 possible oxidoreductase.
  
     0.504
Oant_3825
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bme:BMEII0583 iron(III)-transport ATP-binding protein SfuC; Belongs to the ABC transporter superfamily.
  
    0.497
Oant_3864
TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: bms:BRA0727 glycine cleavage system T protein.
 
 
 0.482
Oant_0302
TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: bmb:BruAb1_0225 SoxD, sarcosine oxidase, delta subunit.
 
 
 0.443
Oant_3595
PFAM: alpha/beta hydrolase fold; KEGG: pau:PA14_37530 putative hydrolase.
 
  
   0.413
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.