STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3880PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pde:Pden_4546 TRAP dicarboxylate transporter-DctP subunit. (355 aa)    
Predicted Functional Partners:
Oant_3879
PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pub:SAR11_1292 TrapT family.
 
  
 0.898
Oant_3878
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: rsp:RSP_2322 TRAP-T family transporter, DctQ (4TMs) subunit.
 
  
 0.896
Oant_3881
Glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; KEGG: bms:BRA0732 glutamine synthetase family protein.
 
     0.859
Oant_3883
PFAM: iron-containing alcohol dehydrogenase; KEGG: bme:BMEII0553 alcohol dehydrogenase.
 
    0.822
Oant_3882
PFAM: aldehyde dehydrogenase; KEGG: mlo:mll3072 dehydrogenase, (succinatesemialdehyde dehydrogenase, aldehyde dehydrogenase, aldehyde dehydrogenase); Belongs to the aldehyde dehydrogenase family.
 
     0.812
Oant_3876
Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: bmb:BruAb2_0501 transcriptional regulator, hypothetical.
 
     0.780
Oant_3877
PFAM: N-formylglutamate amidohydrolase; KEGG: bms:BRA0731 hypothetical protein.
 
     0.642
Oant_0444
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bms:BR0343 hypothetical protein.
 
  
 0.441
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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