STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_3916PFAM: periplasmic binding protein; KEGG: bms:BRA0756 iron compound ABC transporter, periplasmic iron compound-binding protein. (342 aa)    
Predicted Functional Partners:
Oant_3914
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0478 iron compound ABC transporter, ATP-binding protein.
 
 
 0.954
Oant_3915
PFAM: transport system permease protein; ABC-3 protein; KEGG: bmb:BruAb2_0477 iron compound ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.950
Oant_1829
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1342 iron compound ABC transporter, ATP-binding protein.
 
 
 0.625
Oant_2826
PFAM: transport system permease protein; KEGG: sme:SMa1745 putative iron uptake protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.625
Oant_1828
PFAM: transport system permease protein; KEGG: bms:BR1345 iron compound ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.622
Oant_4083
PFAM: transport system permease protein; KEGG: pfl:PFL_3624 ferric vibriobactin ABC transporter, permease protein VC0777; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.619
Oant_2824
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMa1741 putative iron uptake ABC transporter, ATP-binding protein.
 
 
 0.618
Oant_3619
PFAM: transport system permease protein; KEGG: mes:Meso_1443 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.615
Oant_3476
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_1656 ferrichrome transport ATP-binding protein FhuC.
  
 
 0.566
Oant_4085
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pau:PA14_10180 ferric enterobactin transport protein FepC.
  
 
 0.566
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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