STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4005PFAM: regulatory protein LuxR; KEGG: ava:Ava_2028 two component transcriptional regulator, LuxR family. (263 aa)    
Predicted Functional Partners:
Oant_0409
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR0316 sensor histidine kinase/response regulator.
 
 
 0.697
Oant_4008
PFAM: alpha/beta hydrolase fold; KEGG: fal:FRAAL0572 putative hydrolase.
 
   
 0.668
Oant_4006
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: psp:PSPPH_4548 hypothetical protein.
 
     0.627
Oant_4007
PFAM: NADPH-dependent FMN reductase; KEGG: pde:Pden_5119 NADPH-dependent FMN reductase.
 
    0.594
Oant_0596
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; KEGG: bms:BR0481 sensory box/GGDEF domain/EAL domain protein.
  
 
 0.577
Oant_3972
PFAM: regulatory protein LuxR; KEGG: rle:RL0627 putative GerE family transcriptional regulator.
  
     0.504
Oant_2124
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: bmb:BruAb1_1044 sensory box histidine kinase/response regulator.
  
 
 0.502
Oant_3908
GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: GAF domain protein; KEGG: atc:AGR_L_1636 hypothetical protein.
  
 
 0.465
Oant_2220
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: sme:SMb20389 hypothetical protein.
 
 
 0.441
Oant_4009
PFAM: major facilitator superfamily MFS_1; KEGG: ppu:PP_1710 MFS transporter, phthalate permease family.
     
 0.404
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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