STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4012PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: bja:bll3410 indolepyruvate ferredoxin oxidoreductase beta subunit. (516 aa)    
Predicted Functional Partners:
Oant_4013
Indolepyruvate ferredoxin oxidoreductase; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bja:bll3411 indolepyruvate ferredoxin oxidoreductase alpha subunit.
 
 
 0.979
Oant_4014
PFAM: NADH:flavin oxidoreductase/NADH oxidase; monooxygenase FAD-binding; KEGG: bja:blr3436 hypothetical protein.
 
   
 0.862
Oant_4027
PFAM: cyclase family protein; KEGG: mlo:mlr5444 hypothetical protein.
 
     0.796
Oant_4018
PFAM: Endoribonuclease L-PSP; KEGG: mlo:mll5429 hypothetical protein.
 
    0.790
Oant_4016
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: azo:azo1932 probable enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
   
 0.778
Oant_4010
PFAM: regulatory protein MarR; KEGG: mlo:mlr5447 transcriptional regulator.
 
    0.770
Oant_4003
TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase; KEGG: bja:bll6076 putative acetyl-CoA synthetase.
 
  
 0.721
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
    
 
 0.715
Oant_4026
PFAM: regulatory protein MarR; KEGG: rpe:RPE_3230 transcriptional regulator, MarR family.
  
    0.705
Oant_4017
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bja:blr3437 putative acyl-CoA dehydrogenase.
 
  
 0.657
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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