STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4041KEGG: bmb:BruAb2_0407 hypothetical protein. (238 aa)    
Predicted Functional Partners:
Oant_4042
PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: bms:BRA0826 ATP-dependent RNA helicase, DEAD/DEAH box family.
 
    0.957
Oant_4044
PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: mlo:mll5481 probable DNA ligase.
 
   
 0.916
Oant_4043
KEGG: mlo:mll5484 putative mRNA 3-end processing factor.
 
     0.902
Oant_0151
PFAM: protein of unknown function DUF1052; KEGG: bms:BR0138 hypothetical protein.
  
     0.665
Oant_2017
PFAM: uncharacterised conserved protein UCP032025; KEGG: bmb:BruAb1_1180 hypothetical protein.
  
     0.476
Oant_3673
PFAM: protein of unknown function DUF983; KEGG: bms:BRA0606 hypothetical protein.
  
     0.455
Oant_0587
PFAM: protein of unknown function DUF983; KEGG: bms:BR0473 hypothetical protein.
  
     0.420
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.