STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4064Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: rru:Rru_A1335 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (329 aa)    
Predicted Functional Partners:
Oant_4063
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20316 putative ABC transporter periplasmic sugar-binding protein.
   0.916
Oant_4062
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMb20317 putative sugar ABC transporter ATP-binding protein.
 
   0.876
Oant_4067
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bms:BR1630 sugar-binding transcriptional regulator, LacI family.
 
   0.853
Oant_4371
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20316 putative ABC transporter periplasmic sugar-binding protein.
  
   0.811
Oant_0292
Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb21377 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
 
   0.803
Oant_2807
Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ret:RHE_CH00612 ribose ABC transporter, substrate-binding protein.
 
   0.788
Oant_4065
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb1_1620 RbsA-2, ribose ABC transporter, ATP-binding protein.
 
   0.778
Oant_4370
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vei:Veis_4329 ABC transporter related.
  
   0.760
Oant_2842
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_85 ABC transporter ATP binding protein.
  
   0.741
Oant_3345
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: atc:AGR_C_5109 ribose ABC transporter, periplasmic D-ribose-binding protein VCA0130.
 
   0.739
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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