STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4074PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_2554 D-amino-acid dehydrogenase. (419 aa)    
Predicted Functional Partners:
dadA
FAD dependent oxidoreductase; Oxidative deamination of D-amino acids; Belongs to the DadA oxidoreductase family.
  
  
 
0.926
Oant_3709
PFAM: FAD dependent oxidoreductase; KEGG: bms:BRA0630 amino acid dehydrogenase, putative.
  
  
 
0.925
Oant_1110
D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase; KEGG: bmb:BruAb1_1774 D-amino acid dehydrogenase small subunit.
  
  
 
0.921
Oant_4428
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Xylose isomerase domain protein TIM barrel; KEGG: ret:RHE_PC00215 putative 4-hydroxyphenylpyruvate dioxygenase protein.
   
 
 0.910
hisC
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: bme:BMEI0080 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
  0.900
Oant_1427
PFAM: aminotransferase class IV; KEGG: bms:BRA0934 D-alanine aminotransferase, putative.
     
  0.900
Oant_1672
PFAM: aminotransferase class I and II; KEGG: bms:BR1495 aspartate aminotransferase.
     
  0.900
Oant_2648
PFAM: aminotransferase class I and II; KEGG: bms:BR0635 histidinol-phosphate aminotransferase, putative.
   
 
  0.900
Oant_3562
PFAM: aminotransferase class IV; KEGG: bja:bll7596 D-alanine aminotransferase.
     
  0.900
hisC-2
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: sme:SMa0387 putative HisC3 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
  0.900
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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