STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4077KEGG: vei:Veis_0794 hypothetical protein. (237 aa)    
Predicted Functional Partners:
Oant_4078
PFAM: extracellular solute-binding protein family 3; KEGG: bja:blr6816 hypothetical protein.
 
     0.805
Oant_4076
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr8118 ABC transporter permease protein.
       0.774
Oant_4074
PFAM: FAD dependent oxidoreductase; KEGG: aav:Aave_2554 D-amino-acid dehydrogenase.
 
     0.677
Oant_4075
PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr8119 ABC transporter ATP-binding protein.
       0.653
Oant_4079
PFAM: regulatory protein AsnC/Lrp family; KEGG: rru:Rru_A1172 transcriptional regulator, AsnC family.
       0.628
Oant_4073
KEGG: bja:blr6818 hypothetical protein.
 
    
0.590
Oant_4435
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_3943 BFD-like (2Fe-2S)-binding region.
 
     0.461
Oant_4080
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: csa:Csal_0665 transcriptional regulator, LysR family.
       0.447
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.