STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4136PFAM: ferric iron reductase; KEGG: sme:SMc01658 putative transport protein. (251 aa)    
Predicted Functional Partners:
Oant_4135
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sme:SMc01657 putative ferrichrome-iron receptor precursor protein.
 
  
 0.927
Oant_4137
PFAM: periplasmic binding protein; KEGG: sme:SMc01659 putative transport transmembrane protein.
 
    0.885
Oant_1217
KEGG: bms:BR1698 TolA protein.
  
  
 0.750
Oant_1256
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
  
 0.750
Oant_1652
PFAM: protease inhibitor Kazal-type; KEGG: sme:SMc04226 hypothetical lipoprotein transmembrane.
  
    0.708
Oant_2776
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: rsp:RSP_4273 TonB-dependent receptor protein.
 
  
 0.618
Oant_3474
TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sme:SMc01611 putative ferrichrome-iron receptor precursor protein.
 
  
 0.613
Oant_3230
TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: cytochrome d1 heme region; protein of unknown function DUF305; KEGG: net:Neut_0066 40-residue YVTN family beta-propeller repeat protein.
  
    0.556
Oant_3417
KEGG: sme:SMc02590 hypothetical protein.
  
     0.551
Oant_3164
PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: mes:Meso_4144 phage integrase-like SAM-like; Belongs to the 'phage' integrase family.
  
     0.503
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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