STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4194Two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; KEGG: bmb:BruAb2_1077 transcriptional regulator. (227 aa)    
Predicted Functional Partners:
Oant_0409
Integral membrane sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bms:BR0316 sensor histidine kinase/response regulator.
 
 
 0.941
Oant_2124
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: bmb:BruAb1_1044 sensory box histidine kinase/response regulator.
 
 
 0.916
Oant_4197
KEGG: bmb:BruAb2_1080 hypothetical MotC chemotaxis protein.
 
   
 0.879
Oant_4191
Flagellar hook-associated 3 family protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.848
Oant_4190
PFAM: flagellar FlaF family protein; KEGG: bmb:BruAb2_1073 hypothetical FlaF.
 
  
 0.834
flbT
Flagellar FlbT family protein; Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation.
 
  
 0.824
Oant_4195
PFAM: Lytic transglycosylase catalytic; KEGG: bmb:BruAb2_1078 hypothetical protein.
 
     0.814
Oant_2663
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: bmb:BruAb1_0635 histidine kinase.
 
 
 0.805
pdhS
PAS/PAC sensor signal transduction histidine kinase; Functions as a polar differentiation marker. Essential protein that, by localizing in the old pole of dividing cells, controls cell division and maturation, probably through control of DivK phosphorylation status and cellular distribution, which in turn regulates CtrA, a transcriptional regulator of the minB operon. The asymmetrical localization of this protein is probably required for cells to enter a new division cycle (By similarity).
 
 
 0.804
Oant_4183
KEGG: bmb:BruAb2_1066 hypothetical protein.
 
    0.804
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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