STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
potA-4Spermidine/putrescine ABC transporter ATPase subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (353 aa)    
Predicted Functional Partners:
Oant_4231
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0113 spermidine/putrescine ABC transporter, permease protein, putative.
 
  
 0.957
Oant_4230
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmb:BruAb2_0112 spermidine/putrescine ABC transporter, permease protein, hypothetical.
 
    0.947
Oant_4228
PFAM: extracellular solute-binding protein family 1; KEGG: bmb:BruAb2_0113 ABC transporter, periplasmic substrate-binding protein.
 
  
 0.880
Oant_4229
Hypothetical protein.
       0.752
Oant_4153
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3393 ABC opine/polyamine transporter, inner membrane subunit.
  
 0.637
Oant_4154
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3395 ABC opine/polyamine transporter, inner membrane subunit.
 
 
 0.588
Oant_4438
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3946 binding-protein-dependent transport systems inner membrane component.
 
 
 0.553
Oant_3579
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa0394 putative ABC transporter, permease.
 
 
 0.530
Oant_3705
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA4247 ABC transporter permease protein.
 
  
 0.530
Oant_3714
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0329 spermidine/putrescine ABC transporter, permease protein.
    0.517
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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