STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4235PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bme:BMEII1125 dimeric dihydrodiol dehydrogenase. (356 aa)    
Predicted Functional Partners:
Oant_4236
PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: bms:BRA0109 oxidoreductase, Gfo/Idh/MocA family.
  
     0.747
Oant_1565
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class-III; KEGG: bmb:BruAb1_1588 DegT/DnrJ/EryC1/StrS family protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.537
Oant_3838
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bms:BRA0714 TPP-requiring enzyme IolD; Belongs to the TPP enzyme family.
  
  
 0.491
Oant_3840
PFAM: Myo-inositol catabolism IolB domain protein; KEGG: bme:BMEII0569 iolB protein.
  
  
 0.478
Oant_2765
Beta-glucosidase; PFAM: glycoside hydrolase family 1; KEGG: sma:SAV1801 putative beta-glucosidase.
 
    0.446
Oant_2719
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mlo:mlr7552 dTDP-D-glucose-4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.421
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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