STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4270KEGG: bms:BRA0072 hypothetical protein. (528 aa)    
Predicted Functional Partners:
Oant_1019
KEGG: bmb:BruAb1_1923 hypothetical protein.
 
     0.771
Oant_2505
TIGRFAM: exopolysaccharide transport protein family; PFAM: lipopolysaccharide biosynthesis protein; KEGG: mlo:mlr8439 succinoglycan transport protein ExoP.
 
   
 0.768
Oant_1447
KEGG: bms:BRA0921 outer surface protein.
  
     0.749
Oant_1225
Porin opacity type; PFAM: surface antigen msp4 family protein; porin opacity type; KEGG: bms:BR1689 outer surface protein.
  
     0.746
Oant_1769
PFAM: AsmA family protein; KEGG: bms:BR1408 hypothetical protein.
  
     0.739
Oant_1349
KEGG: bmb:BruAb2_0972 hypothetical membrane protein.
  
     0.736
Oant_2503
KEGG: bmb:BruAb1_0800 hypothetical protein.
  
     0.710
Oant_4029
KEGG: bmb:BruAb2_0441 hypothetical protein.
  
     0.700
Oant_2653
KEGG: bms:BR0629 hypothetical protein.
  
    0.698
Oant_1617
KEGG: bmb:BruAb1_1538 hypothetical protein.
  
     0.696
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.