STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4348PFAM: DSBA oxidoreductase; KEGG: rle:pRL100231 putative thioredoxin. (198 aa)    
Predicted Functional Partners:
Oant_4349
PFAM: extracellular solute-binding protein family 3; KEGG: rle:pRL100229 putative substrate-binding ABC transport protein.
       0.662
Oant_4347
PFAM: FMN-binding domain protein; KEGG: bmb:BruAb2_0906 hypothetical transcriptional regulator NosR.
 
     0.550
Oant_4341
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
     0.506
Oant_4342
PFAM: NosL family protein; KEGG: bmb:BruAb2_0901 hypothetical protein disulfide isomerase NosL.
 
     0.497
Oant_4343
KEGG: bmb:BruAb2_0902 NosY, nitrous-oxide reductase, NosY component.
 
     0.497
Oant_4345
PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: bmb:BruAb2_0904 NosD, copper ABC transporter, periplasmic copper-binding protein.
 
     0.496
nosZ
Nitrous-oxide reductase; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
 
     0.491
Oant_4350
PFAM: extracellular solute-binding protein family 3; KEGG: ret:RHE_PC00008 probable amino acid ABC transporter, substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
       0.482
Oant_4344
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmf:BAB2_0926 ATP/GTP-binding site motif A (P-loop):ABC transporter:AAA ATPase.
       0.414
Oant_4351
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: ret:RHE_PC00007 probable amino acid ABC transporter, ATP-binding protein.
       0.414
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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