STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4412KEGG: bmb:BruAb2_0675 endoglucanase family protein; Belongs to the glycosyl hydrolase 26 family. (314 aa)    
Predicted Functional Partners:
Oant_4415
KEGG: bmb:BruAb2_0678 glycosyl transferase, group 2 family protein.
     0.976
Oant_4416
TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bmb:BruAb2_0679 GalE-2, UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
     0.784
Oant_4413
PFAM: protein of unknown function DUF995; KEGG: bmb:BruAb2_0676 hypothetical protein.
       0.776
Oant_4414
PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: bmb:BruAb2_0677 Ugd, UDP-glucose 6-dehydrogenase.
       0.776
Oant_4417
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: bms:BRA0542 NAD-dependent epimerase/dehydratase family protein.
 
     0.772
Oant_3442
PFAM: polysaccharide pyruvyl transferase; KEGG: sme:SMb21321 putative membrane-anchored protein.
 
     0.608
Oant_3443
PFAM: polysaccharide pyruvyl transferase; KEGG: sme:SMb21322 putative membrane-anchored protein.
 
     0.592
Oant_4411
PFAM: protein of unknown function DUF995; KEGG: bmb:BruAb2_0674 hypothetical protein.
       0.591
Oant_0687
PFAM: polysaccharide deacetylase; KEGG: bmb:BruAb1_0523 hypothetical protein.
 
   
 0.510
Oant_2872
KEGG: bmb:BruAb2_0923 hypothetical protein.
  
     0.487
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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