STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4439PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_3947 ABC transporter related; Belongs to the ABC transporter superfamily. (348 aa)    
Predicted Functional Partners:
Oant_4438
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3946 binding-protein-dependent transport systems inner membrane component.
 
 
 0.954
Oant_4437
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_3945 binding-protein-dependent transport systems inner membrane component.
 
  
 0.953
Oant_4433
PFAM: extracellular solute-binding protein family 1; KEGG: pol:Bpro_3941 extracellular solute-binding protein, family 1.
 
  
 0.865
Oant_4435
PFAM: BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pol:Bpro_3943 BFD-like (2Fe-2S)-binding region.
 
    0.817
Oant_4436
KEGG: pol:Bpro_3944 hypothetical protein.
 
     0.808
Oant_4434
PFAM: FAD dependent oxidoreductase; KEGG: pol:Bpro_3942 FAD dependent oxidoreductase.
 
    0.802
Oant_4153
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3393 ABC opine/polyamine transporter, inner membrane subunit.
  
 0.795
Oant_4154
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsp:RSP_3395 ABC opine/polyamine transporter, inner membrane subunit.
 
 
 0.747
Oant_3714
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bms:BRA0329 spermidine/putrescine ABC transporter, permease protein.
    0.687
Oant_2804
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4253 binding-protein-dependent transport systems inner membrane component.
 
 
 0.627
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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