STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4441PFAM: basic membrane lipoprotein; KEGG: bms:BRA0010 lipoprotein, Bmp family. (368 aa)    
Predicted Functional Partners:
Oant_4442
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0009 ABC transporter, ATP-binding protein.
 
 
 0.993
Oant_4443
PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0008 hypothetical ABC transporter, permease protein.
 
 
 0.986
Oant_4444
PFAM: inner-membrane translocator; KEGG: bms:BRA0007 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.985
Oant_3308
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rle:pRL90205 putative ATP-binding component of ABC transporter.
 
 
 0.972
Oant_3632
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0654 ABC transporter, ATP-binding protein.
 
 
 0.970
Oant_3306
PFAM: inner-membrane translocator; KEGG: sme:SMa2369 putative ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.965
Oant_3307
PFAM: inner-membrane translocator; KEGG: rle:pRL90206 putative permease component of ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.965
Oant_3630
PFAM: inner-membrane translocator; KEGG: bms:BRA0568 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.965
Oant_3631
PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0655 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.964
Oant_3310
PFAM: basic membrane lipoprotein; KEGG: sme:SMa2361 hypothetical protein.
  
 
 
0.927
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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