STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Oant_4445PFAM: ADP-ribosylation/Crystallin J1; KEGG: sma:SAV1919 hypothetical protein. (468 aa)    
Predicted Functional Partners:
Oant_2088
PFAM: nitrogen regulatory protein P-II; KEGG: bmb:BruAb1_1010 GlnB, nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
   
 
 0.801
Oant_0243
TIGRFAM: phage portal protein, HK97 family; PFAM: phage portal protein; KEGG: ecs:ECs1544 putative portal protein.
   
 
 0.784
Oant_4443
PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0008 hypothetical ABC transporter, permease protein.
       0.782
Oant_4444
PFAM: inner-membrane translocator; KEGG: bms:BRA0007 ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
       0.782
Oant_4446
PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: bms:BRA0006 inosine-uridine preferring nucleoside hydrolase.
       0.719
Oant_4441
PFAM: basic membrane lipoprotein; KEGG: bms:BRA0010 lipoprotein, Bmp family.
 
     0.683
Oant_4442
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmb:BruAb2_0009 ABC transporter, ATP-binding protein.
       0.604
Your Current Organism:
Ochrobactrum anthropi
NCBI taxonomy Id: 439375
Other names: O. anthropi ATCC 49188, Ochrobactrum anthropi ATCC 49188, Ochrobactrum anthropi DSM 6882, Ochrobactrum anthropi LMG 3331, Ochrobactrum anthropi str. ATCC 49188, Ochrobactrum anthropi strain ATCC 49188
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