STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0047PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: adg:Adeg_1087 dinitrogenase iron-molybdenum cofactor biosynthesis protein. (157 aa)    
Predicted Functional Partners:
Aboo_0045
KEGG: ton:TON_0920 hypothetical protein.
       0.790
Aboo_0046
Hypothetical protein; KEGG: tsi:TSIB_0698 iron-molybdenum cofactor-binding protein.
       0.776
Aboo_0826
PFAM: Cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tga:TGAM_0569 ATPase, ParA type/MinD superfamily, containing an inserted ferredoxin domain.
 
  
 0.759
Aboo_0825
PFAM: Cobyrinic acid ac-diamide synthase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tsi:TSIB_0690 ATPase, ParA/MinD family, containing ferredoxin domains.
 
  
 0.738
Aboo_0687
PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: tga:TGAM_0842 dinitrogenase iron-molybdenum cofactor, NIF B/Y/X related.
 
     0.713
Aboo_0048
PFAM: KaiA binding; Circadian clock protein KaiC central region; KEGG: mbu:Mbur_1755 ATPase.
       0.574
Aboo_0049
PFAM: Zinc finger TFIIB-type domain protein; KEGG: hypothetical protein.
       0.574
Aboo_1140
SMART: beta-lactamase domain protein; KEGG: pho:PH1079 hypothetical protein.
 
     0.523
Aboo_0933
PFAM: protein of unknown function DUF134; KEGG: mac:MA4245 hypothetical protein.
 
  
 0.488
Aboo_0906
KEGG: pho:PH0874 hypothetical protein.
 
     0.477
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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