STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0221PFAM: Protein of unknown function DUF1749; KEGG: hau:Haur_1576 hypothetical protein. (288 aa)    
Predicted Functional Partners:
Aboo_0220
KEGG: ton:TON_1123 hypothetical membrane protein.
       0.718
pcm
protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
  
    0.557
Aboo_0792
PFAM: glycosyl transferase group 1; KEGG: tde:TDE2034 glycosyl transferase, group 1 family protein.
 
 
 
 0.546
Aboo_0241
PFAM: glycosyl transferase group 1; KEGG: ton:TON_1697 glycosyltransferase.
   
 
 0.478
Aboo_0243
PFAM: glycosyl transferase group 1; Protein of unknown function DUF1972; KEGG: mma:MM_2218 transposase.
   
 
 0.478
Aboo_0245
PFAM: glycosyl transferase group 1; KEGG: tsi:TSIB_2021 glycosyl transferase.
   
 
 0.478
Aboo_0249
PFAM: glycosyl transferase group 1; KEGG: pth:PTH_0390 glycosyltransferase.
   
 
 0.478
Aboo_0251
PFAM: glycosyl transferase group 1; KEGG: gvi:gll1176 hypothetical protein.
   
 
 0.478
Aboo_0275
PFAM: glycosyl transferase group 1; KEGG: tpe:Tpen_1743 glycosyl transferase, group 1.
   
 
 0.478
Aboo_0276
PFAM: glycosyl transferase group 1; KEGG: tpe:Tpen_1744 glycosyl transferase, group 1.
   
 
 0.478
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.