STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0235KEGG: hor:Hore_22320 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter. (446 aa)    
Predicted Functional Partners:
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
     
 0.796
Aboo_0232
KEGG: pab:PAB1596 hypothetical protein.
       0.777
sat
TIGRFAM: sulfate adenylyltransferase; KEGG: hbu:Hbut_1499 sulfate adenylyltransferase; PFAM: ATP-sulfurylase; Belongs to the sulfate adenylyltransferase family.
     
 0.775
Aboo_0233
KEGG: hoh:Hoch_2295 type I phosphodiesterase/nucleotide pyrophosphatase.
       0.773
Aboo_0236
Hypothetical protein; KEGG: GL16195 gene product from transcript GL16195-RA.
       0.773
Aboo_0230
KEGG: ton:TON_1708 hypothetical protein.
       0.757
Aboo_0237
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: hor:Hore_17270 type I phosphodiesterase/nucleotide pyrophosphatase.
       0.642
Aboo_0229
PFAM: nitroreductase; KEGG: pfu:PF0715 NAD(P)H oxidase.
  
  
 0.535
Aboo_1113
KEGG: tga:TGAM_0963 sodium:solute symporter family protein; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
   
 0.421
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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