STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0324Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: kol:Kole_1597 CBS domain containing membrane protein. (147 aa)    
Predicted Functional Partners:
Aboo_0325
PFAM: sodium/hydrogen exchanger; KEGG: tga:TGAM_0304 Na+/H+ antiporter, NapA type (NapA).
     
 0.781
Aboo_0326
PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: tvo:TVN0258 hypothetical protein.
     
 0.775
Aboo_0323
TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; GAF domain protein; KEGG: afu:AF0448 signal-transducing histidine kinase, putative; SMART: PAS domain containing protein; histidine kinase A domain protein; GAF domain protein.
       0.651
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
  
 0.513
Aboo_0327
Peptidase S53 propeptide; KEGG: cce:Ccel_1543 cellulosome anchoring protein cohesin region; PFAM: Peptidase S53 propeptide; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein.
       0.497
Aboo_0686
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase.
  
 
 0.497
Aboo_0322
Hypothetical protein; KEGG: GI23746 gene product from transcript GI23746-RA.
       0.470
Aboo_0496
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: tpe:Tpen_1824 dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
   0.468
Aboo_0571
KEGG: chl:Chy400_1355 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: Miro domain protein.
  
 0.449
Aboo_1171
PFAM: protein of unknown function ATP binding; KEGG: tvo:TVN0036 GTPase.
  
 0.449
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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