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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0331TIGRFAM: translation initiation factor, aIF-2BII family; eIF-2B alpha/beta/delta-related uncharacterized protein; KEGG: mfe:Mefer_1167 translation initiation factor, aIF-2BII family; PFAM: initiation factor 2B related; Belongs to the eIF-2B alpha/beta/delta subunits family. (309 aa)    
Predicted Functional Partners:
eif2a
Translation initiation factor 2, alpha subunit; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-alpha family.
   
 0.989
eif2g
Protein synthesis factor GTP-binding protein; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily.
   
 0.979
Aboo_0332
Thymidine phosphorylase; Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.
    
 0.936
Aboo_0257
TIGRFAM: glucose-1-phosphate thymidylyltransferase; KEGG: saf:SULAZ_0360 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase.
   
 0.760
Aboo_0280
PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: sto:ST0452 glucose-1-phosphate thymidylyltransferase.
   
 0.760
Aboo_0285
PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: rci:RCIX1434 glucose-1-phosphate thymidylyltransferase.
   
 0.760
Aboo_0708
PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; KEGG: mth:MTH1523 glucose-1-phosphate adenylyltransferase related protein.
   
 0.760
Aboo_1161
PFAM: Nucleotidyl transferase; KEGG: tsi:TSIB_2017 sugar-phosphate nucleotydyltransferase.
   
 0.760
rbcL
Ribulose bisphosphate carboxylase, type III; Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase. Belongs to the RuBisCO large chain family. Type III subfamily.
    
 0.712
Aboo_0330
PFAM: protein of unknown function DUF964; protein of unknown function DUF1333; KEGG: hor:Hore_15270 hypothetical protein.
       0.678
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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