STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nnrECarbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] (524 aa)    
Predicted Functional Partners:
Aboo_0351
PFAM: GCN5-related N-acetyltransferase; KEGG: hmu:Hmuk_2631 GCN5-related N-acetyltransferase.
       0.773
serS
seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).
     
 0.683
Aboo_0348
PFAM: CMP/dCMP deaminase zinc-binding; KEGG: tvo:TVN1288 deoxycytidylate deaminase.
       0.651
Aboo_0352
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: adg:Adeg_1192 zinc-binding alcohol dehydrogenase family protein.
 
    0.635
Aboo_0353
HhH-GPD family protein; KEGG: tko:TK0345 3-methyladenine DNA glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein.
       0.559
Aboo_0344
PFAM: protein of unknown function DUF58; KEGG: pho:PH0774 hypothetical protein.
     
 0.552
Aboo_0345
PFAM: ATPase associated with various cellular activities AAA_3; KEGG: ton:TON_1683 hypothetical protein.
       0.476
Aboo_0343
KEGG: hypothetical protein.
       0.473
Aboo_0346
KEGG: sae:NWMN_0419 hypothetical protein.
       0.473
Aboo_0347
KEGG: mkm:Mkms_0161 hypothetical protein.
       0.473
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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