STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0385PFAM: multiple resistance and pH regulation protein F; KEGG: tko:TK1225 putative monovalent cation/H+ antiporter subunit F. (88 aa)    
Predicted Functional Partners:
Aboo_0382
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: pho:PH1454 putative monovalent cation/H+ antiporter subunit B.
 
 
 0.977
Aboo_0386
PFAM: cation antiporter; KEGG: pfu:PF1453 putative monovalent cation/H+ antiporter subunit E.
 
 
 0.963
Aboo_0381
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: pab:PAB0488 putative monovalent cation/H+ antiporter subunit C.
  
 
 0.953
Aboo_0384
Monovalent cation/proton antiporter, MnhG/PhaG subunit; KEGG: tsi:TSIB_1915 membrane-bound NADP+-reducing complex MBX, subunit MbxC (Na+/H+ transporter subunit); TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit.
  
 
 0.952
Aboo_0379
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: tko:TK1219 NADH dehydrogenase subunit M.
  
 
 0.942
Aboo_0380
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: tga:TGAM_0709 membrane bound oxidoreductase, MbxH subunit (MbxH1).
  
 
 0.942
Aboo_0375
KEGG: kol:Kole_2052 NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; Belongs to the complex I 49 kDa subunit family.
   
   0.868
Aboo_0376
PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: tme:Tmel_1220 NADH dehydrogenase (ubiquinone), 30 kDa subunit.
   
   0.868
Aboo_0377
KEGG: kol:Kole_2054 NADH ubiquinone oxidoreductase 20 kDa subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Belongs to the complex I 20 kDa subunit family.
   
   0.868
Aboo_0383
KEGG: tko:TK1223 hypothetical protein.
   
 
 0.864
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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