STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0435KEGG: mbu:Mbur_0780 hypothetical protein. (144 aa)    
Predicted Functional Partners:
Aboo_0433
PFAM: FeoA family protein; KEGG: tpt:Tpet_0874 FeoA family protein.
       0.814
Aboo_0434
KEGG: tex:Teth514_1140 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; nucleoside recognition domain protein; Ferrous iron transport B domain protein.
       0.814
Aboo_0436
KEGG: tga:TGAM_1106 hypothetical protein.
       0.814
Aboo_0437
Phosphodiesterase, MJ0936 family; KEGG: hbu:Hbut_0693 phosphoesterase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase.
       0.693
fbp
Protein of unknown function DUF100; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).
       0.570
Aboo_0438
Hypothetical protein; KEGG: ftn:FTN_1431 dTDP-glucose 4,6-dehydratase.
       0.553
Aboo_0439
PFAM: Protein of unknown function DUF835; KEGG: pab:PAB0205 hypothetical protein.
       0.553
Aboo_0440
PFAM: GvpD gas vesicle; KEGG: tac:Ta0953m ATPase.
       0.553
Aboo_0441
KEGG: hsl:OE2375F hypothetical protein.
       0.553
Aboo_0431
SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: tex:Teth514_1306 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.416
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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