STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0528PFAM: ROK family protein; KEGG: mmb:Mmol_0832 ROK family protein. (266 aa)    
Predicted Functional Partners:
Aboo_0187
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase; KEGG: afu:AF0458 phosphomannomutase (pmm).
 
 
 0.933
Aboo_0590
KEGG: tsi:TSIB_0813 phosphoglucose isomerase (PGI); PFAM: glucose-6-phosphate isomerase.
    
 0.933
Aboo_1538
KEGG: tvo:TVN0620 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; Belongs to the phosphohexose mutase family.
  
 
 0.925
Aboo_0710
Transaldolase; KEGG: aae:aq_119 putative translaldolase; PFAM: Transaldolase.
  
 
 0.874
fbp
Protein of unknown function DUF100; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).
    
 0.838
Aboo_0604
Glycerate kinase; KEGG: tsi:TSIB_1605 putative glycerate kinase; PFAM: MOFRL domain protein.
    
  0.818
Aboo_0529
PFAM: glycoside hydrolase family 1; KEGG: pho:PH0366 beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
  
 0.810
Aboo_0712
PFAM: Transketolase domain protein; KEGG: dsy:DSY4868 hypothetical protein.
    
 0.810
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
    
  0.808
Aboo_0711
Transketolase central region; KEGG: tvo:TVN0667 transketolase; PFAM: Transketolase central region; Transketolase domain protein; SMART: Transketolase central region.
    
 0.808
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.