Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Aboo_0623 | Aboo_0624 | Aboo_0623 | Aboo_0624 | Adenylyl cyclase CyaB; KEGG: afu:AF1988 hypothetical protein; TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase. | KEGG: mtp:Mthe_1094 hypothetical protein. | 0.773 |
Aboo_0623 | Aboo_0626 | Aboo_0623 | Aboo_0626 | Adenylyl cyclase CyaB; KEGG: afu:AF1988 hypothetical protein; TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase. | KEGG: rbi:RB2501_16214 hypothetical protein. | 0.707 |
Aboo_0623 | Aboo_0627 | Aboo_0623 | Aboo_0627 | Adenylyl cyclase CyaB; KEGG: afu:AF1988 hypothetical protein; TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase. | KEGG: tsi:TSIB_0673 hypothetical protein. | 0.504 |
Aboo_0623 | Aboo_0628 | Aboo_0623 | Aboo_0628 | Adenylyl cyclase CyaB; KEGG: afu:AF1988 hypothetical protein; TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase. | KEGG: ton:TON_1053 hypothetical protein. | 0.504 |
Aboo_0623 | ppa | Aboo_0623 | Aboo_0625 | Adenylyl cyclase CyaB; KEGG: afu:AF1988 hypothetical protein; TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase. | Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.737 |
Aboo_0624 | Aboo_0623 | Aboo_0624 | Aboo_0623 | KEGG: mtp:Mthe_1094 hypothetical protein. | Adenylyl cyclase CyaB; KEGG: afu:AF1988 hypothetical protein; TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase. | 0.773 |
Aboo_0624 | Aboo_0626 | Aboo_0624 | Aboo_0626 | KEGG: mtp:Mthe_1094 hypothetical protein. | KEGG: rbi:RB2501_16214 hypothetical protein. | 0.707 |
Aboo_0624 | Aboo_0627 | Aboo_0624 | Aboo_0627 | KEGG: mtp:Mthe_1094 hypothetical protein. | KEGG: tsi:TSIB_0673 hypothetical protein. | 0.504 |
Aboo_0624 | Aboo_0628 | Aboo_0624 | Aboo_0628 | KEGG: mtp:Mthe_1094 hypothetical protein. | KEGG: ton:TON_1053 hypothetical protein. | 0.504 |
Aboo_0624 | ppa | Aboo_0624 | Aboo_0625 | KEGG: mtp:Mthe_1094 hypothetical protein. | Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.737 |
Aboo_0626 | Aboo_0623 | Aboo_0626 | Aboo_0623 | KEGG: rbi:RB2501_16214 hypothetical protein. | Adenylyl cyclase CyaB; KEGG: afu:AF1988 hypothetical protein; TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase. | 0.707 |
Aboo_0626 | Aboo_0624 | Aboo_0626 | Aboo_0624 | KEGG: rbi:RB2501_16214 hypothetical protein. | KEGG: mtp:Mthe_1094 hypothetical protein. | 0.707 |
Aboo_0626 | Aboo_0627 | Aboo_0626 | Aboo_0627 | KEGG: rbi:RB2501_16214 hypothetical protein. | KEGG: tsi:TSIB_0673 hypothetical protein. | 0.547 |
Aboo_0626 | Aboo_0628 | Aboo_0626 | Aboo_0628 | KEGG: rbi:RB2501_16214 hypothetical protein. | KEGG: ton:TON_1053 hypothetical protein. | 0.547 |
Aboo_0626 | ppa | Aboo_0626 | Aboo_0625 | KEGG: rbi:RB2501_16214 hypothetical protein. | Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.741 |
Aboo_0627 | Aboo_0623 | Aboo_0627 | Aboo_0623 | KEGG: tsi:TSIB_0673 hypothetical protein. | Adenylyl cyclase CyaB; KEGG: afu:AF1988 hypothetical protein; TIGRFAM: adenylyl cyclase CyaB; PFAM: adenylate cyclase. | 0.504 |
Aboo_0627 | Aboo_0624 | Aboo_0627 | Aboo_0624 | KEGG: tsi:TSIB_0673 hypothetical protein. | KEGG: mtp:Mthe_1094 hypothetical protein. | 0.504 |
Aboo_0627 | Aboo_0626 | Aboo_0627 | Aboo_0626 | KEGG: tsi:TSIB_0673 hypothetical protein. | KEGG: rbi:RB2501_16214 hypothetical protein. | 0.547 |
Aboo_0627 | Aboo_0628 | Aboo_0627 | Aboo_0628 | KEGG: tsi:TSIB_0673 hypothetical protein. | KEGG: ton:TON_1053 hypothetical protein. | 0.786 |
Aboo_0627 | ppa | Aboo_0627 | Aboo_0625 | KEGG: tsi:TSIB_0673 hypothetical protein. | Inorganic diphosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. | 0.526 |
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