STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0779Periplasmic copper-binding protein; KEGG: mvu:Metvu_0881 cysteine protease-like protein; PFAM: periplasmic copper-binding; peptidase C1A papain; Two component regulator three Y domain protein; SMART: PKD domain containing protein; Fibronectin type III domain protein; Parallel beta-helix repeat. (1332 aa)    
Predicted Functional Partners:
Aboo_0780
PFAM: purine or other phosphorylase family 1; KEGG: tsi:TSIB_1419 purine-nucleoside phosphorylase.
 
   0.691
mptA
Protein of unknown function DUF198; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin.
 
     0.665
Aboo_0782
PFAM: peptidase M16 domain protein; KEGG: tpd:Teth39_1201 peptidase M16 domain-containing protein.
  
  
 0.479
Aboo_1467
TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: kol:Kole_1230 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase.
    
 
 0.466
Aboo_0958
KEGG: mfe:Mefer_1519 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: TGS domain protein; GTP-binding protein HSR1-related.
    
   0.459
Aboo_0107
Proteinase inhibitor I4 serpin; KEGG: mac:MA2246 squamous cell carcinoma antigen; PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin; Belongs to the serpin family.
   
 0.434
Aboo_1296
KEGG: tga:TGAM_0609 serine protease inhibitor, serpin; PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin; Belongs to the serpin family.
   
 0.434
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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