close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0807KEGG: dtu:Dtur_1686 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding. (404 aa)    
Predicted Functional Partners:
Aboo_0375
KEGG: kol:Kole_2052 NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; Belongs to the complex I 49 kDa subunit family.
 
 0.999
Aboo_0376
PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: tme:Tmel_1220 NADH dehydrogenase (ubiquinone), 30 kDa subunit.
  
 0.999
Aboo_0377
KEGG: kol:Kole_2054 NADH ubiquinone oxidoreductase 20 kDa subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Belongs to the complex I 20 kDa subunit family.
  
 0.999
Aboo_0806
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: hor:Hore_06310 NADH dehydrogenase (ubiquinone) 24 kDa subunit.
 0.999
Aboo_0982
KEGG: nth:Nther_2665 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein.
  
 
 0.999
Aboo_0374
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: taf:THA_1683 putative oxidoreductase.
  
 0.994
Aboo_0782
PFAM: peptidase M16 domain protein; KEGG: tpd:Teth39_1201 peptidase M16 domain-containing protein.
  
 
 0.986
Aboo_0317
PFAM: alpha/beta hydrolase fold; KEGG: pfu:PF0480 lysophospholipase.
  
 
 0.955
Aboo_0808
KEGG: pmo:Pmob_0386 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molydopterin dinucleotide-binding region.
 
  
 0.944
Aboo_0677
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tsi:TSIB_1282 membrane-bound hydrogenase MBH 2, subunit Mbh2N (hydrogenase subunit).
  
 0.943
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
Server load: high (94%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.