STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0946TIGRFAM: pyruvate kinase; KEGG: tte:TTE1815 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta. (547 aa)    
Predicted Functional Partners:
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 0.980
Aboo_0985
Malate dehydrogenase (oxaloacetate-decarboxylating); KEGG: pho:PH1275 malate oxidoreductase; PFAM: malic protein NAD-binding; malic protein domain protein.
  
 0.947
Aboo_0356
TIGRFAM: pyruvate, phosphate dikinase; KEGG: dth:DICTH_1202 pyruvate phosphate dikinase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; pyruvate phosphate dikinase PEP/pyruvate-binding.
    
 0.931
pckG
Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.
  
 
 0.921
Aboo_0059
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sfu:Sfum_0016 2-oxoglutarate ferredoxin oxidoreductase subunit beta.
  
 0.920
Aboo_1437
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: mja:MJ0266 pyruvate ferredoxin oxidoreductase subunit beta.
  
 0.920
Aboo_1230
PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; KEGG: tte:TTE1336 oxaloacetate decarboxylase.
  
 
 0.918
Aboo_0298
TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; KEGG: tac:Ta0626m 2-oxoacid-ferredoxin oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase.
   
 0.916
Aboo_1440
TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; KEGG: tvo:TVN0833 2-oxoacid-ferredoxin oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase.
   
 0.916
Aboo_1366
TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; KEGG: ton:TON_0038 hypothetical methylmalonyl-CoA decarboxylase beta chain; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit.
    
 0.915
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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