STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_0980Formate dehydrogenase; KEGG: dat:HRM2_22740 FdhB6; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein. (355 aa)    
Predicted Functional Partners:
Aboo_0977
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_0824 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 0.997
Aboo_0975
KEGG: sfu:Sfum_4092 heterodisulfide reductase subunit C-like.
 
 0.996
Aboo_0976
CoB--CoM heterodisulfide reductase; KEGG: sfu:Sfum_4093 hypothetical protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein.
 
 0.996
Aboo_0979
PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: adg:Adeg_2015 methyl-viologen-reducing hydrogenase delta subunit.
 
 
 0.977
Aboo_0983
Fe-S oxidoreductase-like protein; KEGG: mba:Mbar_A0950 iron-sulfur binding reductase.
    
 0.975
Aboo_0808
KEGG: pmo:Pmob_0386 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molydopterin dinucleotide-binding region.
  
 0.969
Aboo_0978
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dol:Dole_1159 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 
 0.968
Aboo_0080
PFAM: nickel-dependent hydrogenase large subunit; KEGG: kcr:Kcr_0321 coenzyme F420-reducing hydrogenase, alpha subunit.
  
 
 0.950
Aboo_1195
KEGG: tga:TGAM_0512 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PapS reductase), containing one PUA domain and 2 4Fe-4S binding domains; PFAM: phosphoadenosine phosphosulfate reductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; PUA domain containing protein; SMART: PUA domain containing protein.
  
 
 0.894
Aboo_0981
PFAM: ferredoxin; KEGG: sfu:Sfum_4094 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
   
 0.864
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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