STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_1009Hypothetical protein; KEGG: cdf:CD1105 putative DNA primase. (436 aa)    
Predicted Functional Partners:
Aboo_1005
KEGG: tga:TGAM_1768 hypothetical protein.
       0.773
Aboo_1006
KEGG: hypothetical protein.
       0.773
Aboo_1007
Hypothetical protein; KEGG: smu:SMU.562 ATP-dependent protease ClpE.
       0.773
Aboo_1008
Mlkl; KEGG: Mlkl; mixed lineage kinase domain-like; K08849 mixed lineage kinase domain-like; mixed lineage kinase domain-like protein; K08849 mixed lineage kinase domain-like protein.
       0.773
Aboo_0999
Hypothetical protein; KEGG: lrf:LAR_1208 dihydropteroate synthase.
       0.746
Aboo_1000
Hypothetical protein.
       0.746
Aboo_1001
KEGG: pmx:PERMA_A0049 hypothetical protein.
       0.746
Aboo_1002
KEGG: hypothetical protein.
       0.746
Aboo_1003
PFAM: zinc finger SWIM domain protein; KEGG: Poly polymerase central domain containing protein.
       0.746
Aboo_1004
KEGG: ere:EUBREC_2747 hypothetical protein.
       0.746
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.