STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aboo_1040Hypothetical protein; KEGG: bhy:BHWA1_00938 HTH XRE, helix-turn-helix XRE-family like containing protein. (433 aa)    
Predicted Functional Partners:
Aboo_1041
Hypothetical protein; KEGG: PUS7; Pseudouridine synthase.
       0.773
Aboo_1042
MoxR-like protein ATPase-like protein; KEGG: tte:TTE2215 MoxR-like ATPase.
       0.773
Aboo_1043
KEGG: tpe:Tpen_1754 von Willebrand factor, type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A.
       0.773
Aboo_1044
KEGG: hypothetical protein.
       0.773
Aboo_1038
KEGG: cbi:CLJ_B2383 hypothetical protein.
       0.544
Aboo_1039
KEGG: sto:ST1161 hypothetical protein.
       0.544
Aboo_1045
KEGG: fsu:Fisuc_2602 hypothetical protein.
       0.519
Your Current Organism:
Aciduliprofundum boonei
NCBI taxonomy Id: 439481
Other names: A. boonei T469, Aciduliprofundum boonei DSM 19572, Aciduliprofundum boonei T469, Aciduliprofundum boonei str. T469, Aciduliprofundum boonei strain T469
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.